Table IV.

Percentage identities/positives of the protein sequences of CesA proteins identified in poplar, Arabidopsis, barley, and rice

Gene sequences were retrieved from the Stanford Web site (http://cellwall.stanford.edu). Boldface indicates genes involved in secondary cell wall synthesis (data from Taylor et al., 2000, 2003; Joshi, 2003; Tanaka et al., 2003; Burton et al., 2004; Djerbi et al., 2004). At, Arabidopsis; Ptr, P. tremuloides; Hv, barley; Os, rice.

GeneP. tremula × tremuloides (Ptt)/P. trichocarpa
CesA1CesA2CesA3-1CesA3-2CesA4CesA5aCesA7aCesA8aCesA9a
AtCesA162/7462/7461/7161/7261/7368/7868/8083/8962/72
AtCesA259/7074/8157/7156/6977/8362/7463/7661/7361/72
AtCesA363/7462/7761/7260/7162/7681/8779/8668/7865/74
AtCesA472/7958/7064/7562/7357/6961/7162/7361/7261/70
AtCesA560/7273/8056/6957/7075/8063/7563/7561/7360/71
AtCesA661/7376/8456/6957/7079/8563/7563/7561/7360/71
AtCesA762/7362/7461/7261/7261/7365/7466/7663/7481/86
AtCesA864/7457/7080/8779/8756/6959/7060/7260/7160/71
AtCesA959/7276/8456/6956/7077/8464/7462/7661/7360/71
AtCesA1060/7360/7360/7259/7160/7266/7767/7979/8560/71
PtrCesA163/7456/6991/9392/9255/6957/6959/7159/7059/71
PtrCesA262/7162/7360/7258/7061/7265/7566/7663/7388/89
PtrCesA385/8557/6963/7460/7057/6760/7163/7361/7262/71
PtrCesA461/7363/7660/7160/7261/7468/7867/7894/9463/74
PtrCesA560/7162/7458/6957/6963/7490/9080/8567/7764/72
PtrCesA661/7266/7660/7258/6966/7666/7666/7765/7663/73
PtrCesA760/7076/8255/6755/6888/8865/7765/7862/7462/73
HvCesA161/7162/7558/7058/7061/7375/8376/8467/7763/72
HvCesA2b60/7165/7558/7156/6865/7565/7564/7663/7562/72
HvCesA3b61/7261/7459/7158/7061/7376/8277/8467/7664/73
HvCesA4b71/7661/7267/7664/7160/7263/7364/7466/7464/72
HvCesA5/7b68/7965/7978/8578/8665/7967/7967/7967/7865/76
HvCesA662/7462/7461/7260/7162/7367/7768/7980/8662/72
HvCesA8b68/8172/8171/8268/8071/8178/8578/8474/8382/85
OsCesA162/7361/7261/7159/7061/7268/7869/8081/8762/72
OsCesA262/7363/7659/7059/7163/7578/8478/8468/7865/74
OsCesA362/7368/7958/7058/7067/7866/7665/7666/7764/74
OsCesA462/7367/8174/8174/8166/8060/7261/7360/7159/70
OsCesA562/7368/7858/7058/7068/7866/7665/7665/7764/74
OsCesA661/7266/7658/7157/7066/7666/7665/7864/7662/73
OsCesA770/7657/6962/7260/6956/6660/7062/7362/7162/71
OsCesA861/7163/7659/7058/7062/7378/8478/8468/7764/73
OsCesA9b71/8377/8671/8470/8377/8574/8475/8571/8271/82
  • a Full-length sequences retrieved from the genome sequence of P. trichocarpa.

  • b Partial sequences.