Percentage identities/positives of the protein sequences of CesA proteins identified in poplar, Arabidopsis, barley, and rice
Gene sequences were retrieved from the Stanford Web site (http://cellwall.stanford.edu). Boldface indicates genes involved in secondary cell wall synthesis (data from Taylor et al., 2000, 2003; Joshi, 2003; Tanaka et al., 2003; Burton et al., 2004; Djerbi et al., 2004). At, Arabidopsis; Ptr, P. tremuloides; Hv, barley; Os, rice.
Gene | P. tremula × tremuloides (Ptt)/P. trichocarpa | ||||||||
---|---|---|---|---|---|---|---|---|---|
CesA1 | CesA2 | CesA3-1 | CesA3-2 | CesA4 | CesA5a | CesA7a | CesA8a | CesA9a | |
AtCesA1 | 62/74 | 62/74 | 61/71 | 61/72 | 61/73 | 68/78 | 68/80 | 83/89 | 62/72 |
AtCesA2 | 59/70 | 74/81 | 57/71 | 56/69 | 77/83 | 62/74 | 63/76 | 61/73 | 61/72 |
AtCesA3 | 63/74 | 62/77 | 61/72 | 60/71 | 62/76 | 81/87 | 79/86 | 68/78 | 65/74 |
AtCesA4 | 72/79 | 58/70 | 64/75 | 62/73 | 57/69 | 61/71 | 62/73 | 61/72 | 61/70 |
AtCesA5 | 60/72 | 73/80 | 56/69 | 57/70 | 75/80 | 63/75 | 63/75 | 61/73 | 60/71 |
AtCesA6 | 61/73 | 76/84 | 56/69 | 57/70 | 79/85 | 63/75 | 63/75 | 61/73 | 60/71 |
AtCesA7 | 62/73 | 62/74 | 61/72 | 61/72 | 61/73 | 65/74 | 66/76 | 63/74 | 81/86 |
AtCesA8 | 64/74 | 57/70 | 80/87 | 79/87 | 56/69 | 59/70 | 60/72 | 60/71 | 60/71 |
AtCesA9 | 59/72 | 76/84 | 56/69 | 56/70 | 77/84 | 64/74 | 62/76 | 61/73 | 60/71 |
AtCesA10 | 60/73 | 60/73 | 60/72 | 59/71 | 60/72 | 66/77 | 67/79 | 79/85 | 60/71 |
PtrCesA1 | 63/74 | 56/69 | 91/93 | 92/92 | 55/69 | 57/69 | 59/71 | 59/70 | 59/71 |
PtrCesA2 | 62/71 | 62/73 | 60/72 | 58/70 | 61/72 | 65/75 | 66/76 | 63/73 | 88/89 |
PtrCesA3 | 85/85 | 57/69 | 63/74 | 60/70 | 57/67 | 60/71 | 63/73 | 61/72 | 62/71 |
PtrCesA4 | 61/73 | 63/76 | 60/71 | 60/72 | 61/74 | 68/78 | 67/78 | 94/94 | 63/74 |
PtrCesA5 | 60/71 | 62/74 | 58/69 | 57/69 | 63/74 | 90/90 | 80/85 | 67/77 | 64/72 |
PtrCesA6 | 61/72 | 66/76 | 60/72 | 58/69 | 66/76 | 66/76 | 66/77 | 65/76 | 63/73 |
PtrCesA7 | 60/70 | 76/82 | 55/67 | 55/68 | 88/88 | 65/77 | 65/78 | 62/74 | 62/73 |
HvCesA1 | 61/71 | 62/75 | 58/70 | 58/70 | 61/73 | 75/83 | 76/84 | 67/77 | 63/72 |
HvCesA2b | 60/71 | 65/75 | 58/71 | 56/68 | 65/75 | 65/75 | 64/76 | 63/75 | 62/72 |
HvCesA3b | 61/72 | 61/74 | 59/71 | 58/70 | 61/73 | 76/82 | 77/84 | 67/76 | 64/73 |
HvCesA4b | 71/76 | 61/72 | 67/76 | 64/71 | 60/72 | 63/73 | 64/74 | 66/74 | 64/72 |
HvCesA5/7b | 68/79 | 65/79 | 78/85 | 78/86 | 65/79 | 67/79 | 67/79 | 67/78 | 65/76 |
HvCesA6 | 62/74 | 62/74 | 61/72 | 60/71 | 62/73 | 67/77 | 68/79 | 80/86 | 62/72 |
HvCesA8b | 68/81 | 72/81 | 71/82 | 68/80 | 71/81 | 78/85 | 78/84 | 74/83 | 82/85 |
OsCesA1 | 62/73 | 61/72 | 61/71 | 59/70 | 61/72 | 68/78 | 69/80 | 81/87 | 62/72 |
OsCesA2 | 62/73 | 63/76 | 59/70 | 59/71 | 63/75 | 78/84 | 78/84 | 68/78 | 65/74 |
OsCesA3 | 62/73 | 68/79 | 58/70 | 58/70 | 67/78 | 66/76 | 65/76 | 66/77 | 64/74 |
OsCesA4 | 62/73 | 67/81 | 74/81 | 74/81 | 66/80 | 60/72 | 61/73 | 60/71 | 59/70 |
OsCesA5 | 62/73 | 68/78 | 58/70 | 58/70 | 68/78 | 66/76 | 65/76 | 65/77 | 64/74 |
OsCesA6 | 61/72 | 66/76 | 58/71 | 57/70 | 66/76 | 66/76 | 65/78 | 64/76 | 62/73 |
OsCesA7 | 70/76 | 57/69 | 62/72 | 60/69 | 56/66 | 60/70 | 62/73 | 62/71 | 62/71 |
OsCesA8 | 61/71 | 63/76 | 59/70 | 58/70 | 62/73 | 78/84 | 78/84 | 68/77 | 64/73 |
OsCesA9b | 71/83 | 77/86 | 71/84 | 70/83 | 77/85 | 74/84 | 75/85 | 71/82 | 71/82 |