Table II.

Relative signal intensities and tissue biases for genes known or proposed for this report to have roles in vascular tissue differentiation or function

LocusGene SymbolDescriptionLog2 (X versus PC)aLog2 (X versus NV)Log2 (PC versus NV)Tissue Bias, This ReportbRole in Vascular Tissue DifferentiationcReference
At4g32880ATHB-8Homeobox-Leu zipper family2.6*4.4*1.8*XVascular differentiationBaima et al. (2001)
At1g30490ATHB-9/PHVHomeobox-Leu zipper family2.0*2.4*0.4XVascular bundle organizationMcConnell et al. (2001)
At2g34710ATHB-14/PHBHomeobox-Leu zipper family1.7*2.9*1.3XVascular bundle organizationMcConnell et al. (2001)
At1g52150ATHB-15Homeobox-Leu zipper family2.8*3.6*0.9X?
At5g60690REV/IFL1Homeobox-Leu zipper family2.0*3.5*1.5XVascular patterningZhong and Ye (2004)
At1g02250ANAC005NAC domain2.3*2.5*0.3X?
At1g32770ANAC012NAC domain4.5*3.6*−0.8X?
At2g46770ANAC043NAC domain3.4*2.6*−0.8X?
At4g28500ANAC073NAC domain2.3*5.1*2.8X?
At4g28530ANAC074NAC domain1.9*1.6*−0.3X?
At5g64530XND1/ANAC104NAC domain5.9*6.4*0.5X?
At1g63910MYB103R2R3 MYB2.0*3.0*1.0X?
At4g33450MYB69R2R3 MYB4.2*3.0*−1.2X?
At1g17950MYB52R2R3 MYB5.6*2.3*−3.2*X?
At3g46130MYB48R2R3 MYB3.6*3.8*0.1X?
At5g12870MYB46R2R3 MYB3.6*2.9*−0.8X?
At1g66230MYB20R2R3 MYB4.8*5.7*0.9X?
At1g79430APLG2-like transcription factor−6.2*−1.44.8*PCVascular differentiationBonke et al. (2003)
At3g12730G2-like transcription factor−3.6*−0.63.0*PC?
At5g18240MYR1G2-like transcription factor−4.8*−0.34.5*PC?
At4g37750ANTAP2 domain transcription factor−2.9*−0.62.3*PC?
At1g75820CLV1CLAVATA1 receptor kinase−3.6*1.04.5*PC?
At4g20270CLV1-like receptor kinase−2.8*0.83.6*PC?
At2g31085CLE6CLAVATA3/ESR-related 6−3.6*−0.23.4*PC?
At1g69970CLE26CLAVATA3/ESR-related 26−4.6*−0.83.9*PC?
At2g28810Dof transcription factor−3.6*−1.12.5*PC?
At5g62940Dof transcription factor−2.9*0.33.2*PC?
At1g07640OBP2Dof transcription factor−4.9*−1.63.3*PC?Kang and Singh (2000)
At1g32240KAN2G2-like transcription factor−4.2*−3.9*0.2PC/NVVascular bundle organizationEmery et al. (2003)
At4g17695KAN3G2-like transcription factor−3.6*−3.2*0.4PC/NVVascular bundle organizationEmery et al. (2003)
At5g64080XYP1Lipid transfer protein (LTP) family protein−1.9*−1.8*0.1PC/NVVascular patterningMotose et al. (2004)
At2g01830AHK4/WOL/CRE1His kinase0.92.3*1.4NSVascular differentiationInoue et al. (2001); Mahonen et al. (2000); Scheres et al. (1995)
At1g20330CVP1S-Adenosyl-Met-sterol-C-methyltransferase−1.3−0.80.5NSVascular patterningCarland et al. (2002)
At3g52940FKC-14 sterol reductase−0.7−0.40.3NSVascular patterningJang et al. (2000)
At1g13980GNOM/EMB30Unclassified−0.1−0.3−0.2NSVascular patterningSteinmann et al. (1999)
At1g19850MP/IAA24IAA protein 240.41.71.3NSVascular differentiationHardtke and Berleth (1998)
At1g73590PIN1Auxin efflux carrier protein1.02.2*1.3NSVascular patterningGalweiler et al. (1998)
  • a Log2 of the signal ratio for the three pair-wise tissue comparisons as described for Table I. Log2 values representing pair-wise comparisons between significantly different signals are indicated by a single asterisk.

  • b NS, Not significantly tissue biased in any pair-wise comparison or tissue biased in only one pair-wise comparison. Other abbreviations introduced in text.

  • c Terms used to describe vascular tissue roles for characterized genes are from Ye (2002). ?, Genes identified for this report that may play roles in vascular tissue differentiation or function.