Table I.

The Lhc supergene family in poplar

Number of Lhc ESTs in EST libraries of poplar (for details, see Supplemental Table I) assigned to the 39 gene models (www.populus.db.umu.se) for the 20 identified Lhc protein classes. The numbers of amino acids refers to the complete coding region encoding the precursor protein.

ProteinGeneESTsGene ModelAmino Acids
Lhca1Lhca1.131estExt_Genewise1_v1.C_LG_X2607243
Lhca1.22estExt_fgenesh4_pg.C_LG_VIII0315244
Lhca2Lhca2.111eugene3.00010471272
Lhca2.24estExt_fgenesh4_pg.C_LG_III1424269
Lhca3Lhca3108grail3.0012036701274
Lhca4Lhca424grail3.0129002701251
Lhca5Lhca5.11estExt_fgenesh4_pg.C_400276267
Lhca5.2n.d.abeugene3.0002117356
Lhca6Lhca67eugene3.00280046261
Lhcb1Lhcb1.1431grail3.0002067901264
Lhcb1.261estExt_Genewise1_v1.C_LG_V1774264
Lhcb1.337eugene3.00110470264
Lhcb1.411estExt_Genewise1_v1.C_LG_II0002266
Lhcb2Lhcb2.1192estExt_fgenesh4_pm.C_LG_II0962265
Lhcb2.214grail3.0012031401265
Lhcb3Lhcb3.123estExt_Genewise1_v1.C_1340185263
Lhcb3.222estExt_fgenesh4_kg.C_LG_XI0033263
Lhcb4Lhcb4.168grail3.0025015101285
Lhcb4.247grail3.0023029001283
Lhcb4.313estExt_fgenesh4_pm.C_LG_VIII0258275
Lhcb5Lhcb585estExt_Genewise1_v1.C_1250189290
Lhcb6Lhcb6.139estExt_Genewise1_v1.C_LG_I9864257
Lhcb6.239estExt_fgenesh4_kg.C_LG_III0002257
Lhcb7Lhcb73estExt_Genewise1_v1.C_LG_V2296338
PsbSPsbS32estExt_fgenesh4_pg.C_LG_II0752272
ELIPLil1.1351estExt_Genewise1_v1.C_LG_VIII0523182
Lil1.257eugene3.00081476182
Lil1.326estExt_fgenesh4_pg.C_LG_VIII1396182
OHP1Lil26grail3.0023020401119
LIL3Lil3.18estExt_Genewise1_v1.C_290436249
Lil3.24eugene3.01180096258
Lil3.31eugene3.00150905257
Lil3.4n.d.fgenesh1_pg.C_scaffold_9489000001
SEP1Lil4.111estExt_fgenesh4_pg.C_LG_I2581145
Lil4.23estExt_fgenesh4_pg.C_LG_IX0658145
SEP2Lil5.1n.d.estExt_fgenesh4_pg.C_LG_V0240202
Lil5.2n.d.eugene3.00070639202
OHP2Lil6.115estExt_fgenesh4_pg.C_LG_II0599188
Lil6.22estExt_fgenesh4_pg.C_LG_V1127188
  • a n.d., No EST detected but predicted gene-model from genome sequence available.

  • b Pseudogene.