Table III.

Genes differentially expressed in leaf and orange fruit of P35S:SlgalldhRNAi line 8 versus control plants

SGNaDescriptionP ValuebRatioc
Leaf
    Group I: Stress
        U212549Glu decarboxylase0.0082.4
        U212565Ripening-associated membrane protein0.0131.7
        U212578Alcoholacyltransferase0.009−1.6
        U212870Polyphenol oxidase chloroplastic0.0101.6
        U212989TSI-1 protein0.0161.7
        U213021Wound-induced proteinase inhibitor0.0131.6
        U212874Wound-induced proteinase inhibitor0.0082.3
        U212973Metallothionein-like protein0.0171.6
        U213190Cold-induced glucosyltransferase0.0151.7
        U213588Protease inhibitor0.0102.1
        U213613Ethylene-responsive proteinase inhibitor0.0121.9
        U214777Pro-rich protein0.0102.3
        U216788Pro synthetase associated protein0.0082.5
        U215124Ultraviolet-B repressible protein0.0141.6
        U224685Glucan-1,3-β-glucosidase0.0102.1
        U226439UDP-glucuronosyl transferase0.0131.7
        U218272Ser protease0.0171.8
        U214067Geranylgeranyl reductase0.0081.8
    Group II: Photosynthesis; Carbon and Cell Wall Metabolism
        U212564Plastidic aldolase0.0111.7
        U212700Plastidic aldolase0.0111.8
        U212863Chlorophyll a/b-binding protein precursor0.0111.6
        U212865Chlorophyll a/b-binding protein precursor0.0082.3
        U212939Rubisco activase0.0091.9
        U212940Rubisco activase0.0141.8
        U212941Rubisco activase0.0102.3
        U213031Plastocyanin chloroplast precursor0.0141.9
        U213044Xyloglucane endotransglucosylase0.0091.9
        U213080Carbonic anhydrase precursor0.0121.7
        U213214PSII core complex proteins0.0111.8
        U213287PSII core complex proteins0.0101.9
        U213381PSI reaction center subunit0.0121.9
        U213390PSI reaction center subunit0.0111.7
        U213493Pectine esterase0.0081.7
        U213559Pectine esterase0.0101.7
        U214487Extensin0.0111.6
        U216405Xyloglucane endotransglycosylase0.0141.7
        U216855Thioredoxin0.008−1.6
        U220664Glycerol-3-P acyltransferase0.0081.9
        U225515Glyceraldehyde-3-P dehydrogenase0.0111.8
    Group III: Signal Transduction and Hormones
        U212854Calmodulin0.0091.6
        U214384Apetala2-like protein0.0151.6
        U214458RNA-binding protein0.0111.7
        U220213MADS-box protein TDR30.0111.9
        U221524Ser/Thr protein kinase0.0102.0
        U222333Ethylene response binding protein0.0111.6
        U223492F-box protein0.017−2.1
        U225548PP2C0.0111.7
        U213123Arg decarboxylase0.0111.6
        U215755Auxin-binding protein0.0122.3
    Group IV: Miscellaneous
        U213050Glycolate oxidase0.0101.8
        U213604Inorganic pyrophosphatase0.0141.7
        U213912Aminomethyltransferase0.0101.8
        U214617Acetyl-CoA C-acyltransferase0.0131.9
        U215017Sterol C-methyl transferase0.0101.7
        U216066Vacuolar ATP-synthase subunit0.0101.8
        U216256Cytochrome c oxidase0.0121.6
        U216323Translation initiation factor0.0111.6
        U216736Ca2+-ATPase0.0151.6
        U216923Lipid transfer protein0.0101.7
        U217914Metal-transporting P-type ATPase0.0121.8
        U217993Adaptin0.0121.6
        U218299Ribosomal protein0.0111.6
        U218653Sterol C-methyl transferase0.0111.6
        U240467Developmental protein related0.0081.8
Orange Fruit
    Group I: Stress
        U212932Heat shock protein0.0122.1
        U213790Acidic endochitinase0.0111.9
        U216459Gly-rich protein0.0122.0
        U216468Cytosolic heat shock protein0.0114.2
        U218323Heat shock protein0.0112.6
        U214174Coumarate-CoA ligase0.0122.2
    Group II: Photosynthesis; Carbon and Cell Wall Metabolism
        U213287PSII0.0132.9
        U213624Pyruvate decarboxylase0.0122.3
        U216001Extensin class I0.0161.6
        U216086Carbohydrate kinase0.0142.5
        U225512Rubisco0.0112.1
        U225539Glc-1-P adenylyl transferase0.0161.7
    Group III: Signal Transduction and Hormones
        U213126Calreticulin0.0181.6
        U214610WRKY protein0.012−1.6
        U215004AGAMOUS protein0.0111.6
        U216554Hydroxysteroid dehydrogenase0.0182.3
        U216991Ser/Thr protein kinase0.0112.0
        U217359MBF10.0134.5
        U219135Ethylene responsive factor JERF20.0181.6
        U219631GA 20-oxidase0.0171.9
        U229641Ethylene-receptor 2 ETR20.0161.6
        U221533PP2C0.0111.8
        U223066AP2/ERF-type protein0.018−1.8
        U225322Ser/Thr protein kinase0.0161.7
    Group IV: Miscellaneous
        U213332Peptidyl prolyl isomerase0.0172.0
        U216689Threonyl-tRNA synthetase0.0191.8
        U217998Metal transporter0.0111.8
        U219908Ripening regulated protein DDTFR80.0134.5