Table I. Genome location, GWA study statistics, and expression of candidate genes
Mt4.0 DesignationCandidate GeneRankP ValueGWA StudyExpressionConfirmed
Medtr2g020630Flavin-containing Monooxygenase-like (FMO1-LIKE)418.14E-06Mt3.5Root and nodule specific
Medtr2g044570Ring finger protein1-like (RFP1-like)81.62E-07Mt3.5All tissues
Medtr2g044580Endoplasmic reticulum DNAJ protein (ERDJ2)51.30E-07Mt3.5Nodule upregulated
Medtr2g101040Malic enzyme-like1 (MEL1)152.22E-07Mt4.0All tissues
Medtr2g101090Penetration3-like (PEN3-like)12.56E-08Mt4.0Root and nodule upregulatedYes
Medtr2g101120AVR9/CF-9 rapidly elicited protein 1 (ACRE1)233.55E-07Mt4.0All tissues
Medtr2g101190Homeodomain Leu zipper1-like (HLZ1-like)729.65E-07Mt4.0All tissues
Medtr4g020620Ubiquitin conjugate24 like (PHO2-like)125.58E-06Mt3.5Nodule upregulatedYes
Medtr5g088410Partner of NOB1-like (PNO1-like)367.08E-06Mt3.5Root and nodule specificYes
Medtr8g060730F-box like 1 (FBL1-like)24.26E-08Mt3.5Below detection limit