Table I. Gene identification from G. intraradices
Gene NameCDS LengthClosest HomologaDomains, Families, or Functional Sitesb
bp
Nitrate transporter (GiNT)990cBAG70346 (Porphyra yezoensis), identity = 39%Major facilitator superfamily
Glutamine synthetase 1 (GiGS1)1,065dAAY62524 (Glomus intraradices), identity = 99%GLNA_1, Gln synthetase signature 1; GLNA_ATP, Gln synthetase putative ATP-binding region signature
Glutamine synthetase 2 (GiGS2)1,065dAAR11485 (Glomus mosseae), identity = 88%GLNA_1, Gln synthetase signature 1; GLNA_ATP, Gln synthetase putative ATP-binding region signature
Glutamate synthase (GiGluS)759cEED14920 (Talaromyces stipitatus), identity = 68%FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Carbamoyl-phosphate synthase glutamine chain (GiCPS)990cXP961982 (Neurospora crassa), identity = 55%GATASE_TYPE_1, Gln amidotransferase type 1 domain profile
Argininosuccinate synthase (GiASS)1,239dAAW43079 (Cryptococcus neoformans), identity = 71%ARGININOSUCCIN_SYN_1, argininosuccinate synthase signature 1; ARGININOSUCCIN_SYN_2, argininosuccinate synthase signature 2.
Arginosuccinate lyase (GiAL)849cXP002172712 (Schizosaccharomyces japonicus), identity = 66%FUMARATE_LYASES, fumarate lyase signature
Arginase (GiCAR1)945dXP001875445 (Laccaria bicolor), identity = 63%ARGINASE_2, arginase family profile; ARGINASE_1, arginase family signature
Ornithine aminotransferase (GiOAT1)1,329dXP002171771 (Schizosaccharomyces japonicus), identity = 69%AA_TRANSFER_CLASS_3, aminotransferase class III pyridoxal-phosphate attachment site
Ornithine decarboxylase (GiODC)1,335dCAB61758 (Mucor circinelloides), identity = 57%ODR_DC_2_1, Orn/diaminopimelate/Arg decarboxylase family 2 pyridoxal-phosphate attachment site
Urease (GiURE)2,499dXP964986 (Neurospora crassa), identity = 66%UREASE_3, urease domain profile; UREASE_2, urease active site