One GS FLX sequencing run allowed significant generation of sequence for both species, and the vast majority of these could be used to assemble contigs and then matched to Arabidopsis genes.
Data | C. spinosa | C. gynandra |
Raw reads | 313,807 | 402,674 |
Raw nucleotides | 70,564,592 | 91,851,136 |
Raw mean length | 225 | 228 |
Clean reads | 284,318 | 368,333 |
Clean nucleotides | 65,525,139 | 85,681,233 |
Clean mean length | 230 | 232 |
Contigs | 17,655 | 18,992 |
Total length (nucleotides) | 7,746,894 | 9,062,043 |
Total reads | 245,324 | 319,732 |
Percent assembled | 86.3 | 86.8 |